| 1 | (1) | | 32 |  Discovery Channel | 67:21:28 |
| 2 | (1) | | 29 |  Liquigas - Bianchi | + 25 |
| 3 | (1) | | 33 | Lampre - Caffita | + 01:48 |
| 4 | (8) | | 29 |  Saunier Duval - Prodir | + 02:11 |
| 5 | (13) | | 23 |  Selle Italia - Serramenti Diquigiovanni | + 02:18 |
| 6 | (9) | | 29 |  Crédit Agricole | + 03:25 |
| 7 | (2) | | 34 | Domina Vacanze | + 04:05 |
| 8 | (1) | | 24 | Ceramica Panaria - Navigare | + 05:50 |
| 9 | (1) | | 30 | Liquigas - Bianchi | + 06:40 |
| 10 | (1) | | 24 | Illes Balears - Caisse d'Epargne | + 06:44 |
| 11 | (1) | | 23 |  Gerolsteiner | + 06:51 |
| 12 | (6) | | 30 | Fassa Bortolo | + 07:01 |
| 13 | (3) | | 23 | Lampre - Caffita | + 08:03 |
| 14 | - | | 30 | Cofidis | + 08:11 |
| 15 | (15) | | 24 | Liberty Seguros - Würth | + 09:39 |
| 16 | (11) | | 27 | Euskaltel - Euskadi | + 11:14 |
| 17 | (7) | | 25 |  Davitamon-Lotto | + 11:26 |
| 18 | (17) | | 29 | Illes Balears - Caisse d'Epargne | + 11:48 |
| 19 | (9) | | 34 | Domina Vacanze | + 11:57 |
| 20 | (2) | | 31 | Domina Vacanze | + 13:48 |
| 21 | - | | 26 | Team T-Mobile | + 15:58 |
| 22 | (29) | | 28 |  Phonak Hearing Systems | + 18:06 |
| 23 | (34) | | 29 | Selle Italia - Serramenti Diquigiovanni | + 18:24 |
| 24 | (21) | | 24 |  Rabobank | + 19:55 |
| 25 | (6) | | 31 | Crédit Agricole | + 20:02 |
| 26 | (13) | | 29 | Lampre - Caffita | + 20:43 |
| 27 | (16) | | 22 | Ceramica Panaria - Navigare | + 21:56 |
| 28 | (21) | | 25 | Liberty Seguros - Würth | + 28:36 |
| 29 | (17) | | 29 | Cofidis | + 32:35 |
| 30 | (10) | | 31 | Quick Step - Innergetic | + 33:15 |
| 31 | (8) | | 28 | Bouygues Telecom | + 33:56 |
| 32 | (1) | | 31 | Ceramica Panaria - Navigare | + 35:37 |
| 33 | (3) | | 23 | Rabobank | + 38:11 |
| 34 | (7) | | 27 | Ceramica Panaria - Navigare | + 38:45 |
| 35 | (21) | | 25 | Crédit Agricole | + 38:47 |
| 36 | (35) | | 27 |  Team CSC | + 39:22 |
| 37 | - | | 26 | Lampre - Caffita | + 41:43 |
| 38 | (4) | | 27 | Phonak Hearing Systems | + 42:00 |
| 39 | (3) | | 31 | Liquigas - Bianchi | + 43:27 |
| 40 | (7) | | 22 | Phonak Hearing Systems | + 44:59 |
| 41 | (15) | | 28 | Davitamon-Lotto | + 45:14 |
| 42 | (7) | | 24 | Crédit Agricole | + 46:25 |
| 43 | (30) | | 26 | Davitamon-Lotto | + 46:52 |
| 44 | (19) | | 36 | Liquigas - Bianchi | + 47:59 |
| 45 | (31) | | 26 | Saunier Duval - Prodir | + 48:56 |
| 46 | (2) | | 32 | Quick Step - Innergetic | + 49:41 |
| 47 | (3) | | 31 | Illes Balears - Caisse d'Epargne | + 51:30 |
| 48 | (10) | | 29 | Lampre - Caffita | + 56:46 |
| 49 | (11) | | 27 | Liquigas - Bianchi | + 01:00:28 |
| 50 | (19) | | 25 | Ceramica Panaria - Navigare | + 01:00:37 |
| 51 | (27) | | 32 | Team T-Mobile | + 01:02:16 |
| 52 | (11) | | 29 | Saunier Duval - Prodir | + 01:04:45 |
| 53 | (24) | | 28 | Euskaltel - Euskadi | + 01:05:02 |
| 54 | (1) | | 27 | Liberty Seguros - Würth | + 01:08:02 |
| 55 | (3) | | 35 | Euskaltel - Euskadi | + 01:08:18 |
| 56 | (3) | | 25 | Team CSC | + 01:12:26 |
| 57 | (15) | | 26 | Lampre - Caffita | + 01:15:31 |
| 58 | (26) | | 32 | Liberty Seguros - Würth | + 01:17:05 |
| 59 | (5) | | 32 | Lampre - Caffita | + 01:19:57 |
| 60 | (1) | | 34 | Team T-Mobile | + 01:20:19 |
| 61 | (1) | | 34 | Discovery Channel | + 01:21:15 |
| 62 | (2) | | 29 | Rabobank | + 01:22:03 |
| 63 | (4) | | 27 | Lampre - Caffita | + 01:22:32 |
| 64 | (1) | | 25 | Team T-Mobile | + 01:24:11 |
| 65 | (20) | | 34 | Cofidis | + 01:26:41 |
| 66 | (8) | | 30 | Liberty Seguros - Würth | + 01:28:55 |
| 67 | (1) | | 26 | Euskaltel - Euskadi | + 01:31:47 |
| 68 | (1) | | 29 | Gerolsteiner | + 01:32:23 |
| 69 | (11) | | 21 | Française des Jeux | + 01:38:28 |
| 70 | (20) | | 30 | Française des Jeux | + 01:39:19 |
| 71 | (21) | | 27 | Liberty Seguros - Würth | + 01:41:32 |
| 72 | (15) | | 27 | Quick Step - Innergetic | + 01:41:33 |
| 73 | (2) | | 32 | Team CSC | + 01:44:25 |
| 74 | (1) | | 26 | Française des Jeux | + 01:46:20 |
| 75 | (1) | | 24 | Saunier Duval - Prodir | + 01:47:20 |
| 76 | (1) | | 23 | Illes Balears - Caisse d'Epargne | + 01:48:15 |
| 77 | (29) | | 31 | Phonak Hearing Systems | + 01:48:37 |
| 78 | (27) | | 30 | Rabobank | + 01:48:49 |
| 79 | - | | 33 | Team CSC | + 01:49:26 |
| 80 | (2) | | 31 | Domina Vacanze | + 01:49:59 |
| 81 | (11) | | 32 | Team CSC | + 01:50:02 |
| 82 | (29) | | 31 | Liberty Seguros - Würth | + 01:50:09 |
| 83 | (20) | | 24 | Saunier Duval - Prodir | + 01:50:36 |
| 84 | (1) | | 35 | Team CSC | + 01:52:47 |
| 85 | (1) | | 20 | Rabobank | + 01:52:50 |
| 86 | (18) | | 28 | Selle Italia - Serramenti Diquigiovanni | + 01:53:26 |
| 87 | (10) | | 26 | Discovery Channel | + 01:54:25 |
| 88 | (11) | | 24 | Bouygues Telecom | + 01:56:50 |
| 89 | (3) | | 28 | Fassa Bortolo | + 01:58:09 |
| 90 | (8) | | 23 | Quick Step - Innergetic | + 02:01:52 |
| 91 | (2) | | 27 | Ceramica Panaria - Navigare | + 02:03:55 |
| 92 | (2) | | 22 | Euskaltel - Euskadi | + 02:04:07 |
| 93 | (9) | | 24 | Domina Vacanze | + 02:04:17 |
| 94 | (1) | | 28 | Gerolsteiner | + 02:04:47 |
| 95 | (1) | | 29 | Discovery Channel | + 02:05:01 |
| 96 | (8) | | 31 | Fassa Bortolo | + 02:05:34 |
| 97 | - | | 23 | Crédit Agricole | + 02:06:40 |
| 98 | (9) | | 31 | Fassa Bortolo | + 02:06:44 |
| 99 | (8) | | 31 | Fassa Bortolo | + 02:07:38 |
| 100 | (26) | | 26 | Saunier Duval - Prodir | + 02:07:56 |
| 101 | (21) | | 32 | Bouygues Telecom | + 02:10:45 |
| 102 | (8) | | 23 | Domina Vacanze | + 02:11:41 |
| 103 | (30) | | 26 | Team CSC | + 02:11:52 |
| 104 | (3) | | 25 | Ceramica Panaria - Navigare | + 02:12:41 |
| 105 | (7) | | 28 | Cofidis | + 02:13:31 |
| 106 | (24) | | 23 | Rabobank | + 02:15:13 |
| 107 | (7) | | 29 | Team CSC | + 02:15:22 |
| 108 | (7) | | 30 | Phonak Hearing Systems | + 02:15:37 |
| 109 | (7) | | 22 | Bouygues Telecom | + 02:15:44 |
| 110 | (7) | | 36 | Quick Step - Innergetic | + 02:16:14 |
| 111 | (7) | | 26 | Gerolsteiner | + 02:16:15 |
| 112 | (5) | | 30 | Selle Italia - Serramenti Diquigiovanni | + 02:16:18 |
| 113 | (10) | | 29 | Discovery Channel | + 02:17:23 |
| 114 | (1) | | 29 | Française des Jeux | + 02:19:13 |
| 115 | (21) | | 25 | Crédit Agricole | + 02:20:01 |
| 116 | (60) | | 29 | Quick Step - Innergetic | + 02:20:41 |
| 117 | (14) | | 25 | Crédit Agricole | + 02:21:13 |
| 118 | (2) | | 29 | Fassa Bortolo | + 02:21:49 |
| 119 | (18) | | 25 | Phonak Hearing Systems | + 02:22:28 |
| 120 | (1) | | 31 | Cofidis | + 02:22:37 |
| 121 | (17) | | 32 | Fassa Bortolo | + 02:23:13 |
| 122 | (18) | | 32 | Liquigas - Bianchi | + 02:24:16 |
| 123 | (4) | | 31 | Fassa Bortolo | + 02:25:09 |
| 124 | (33) | | 33 | Discovery Channel | + 02:25:22 |
| 125 | (19) | | 28 | Team T-Mobile | + 02:26:15 |
| 126 | (32) | | 21 | Bouygues Telecom | + 02:27:42 |
| 127 | (8) | | 31 | Illes Balears - Caisse d'Epargne | + 02:27:49 |
| 128 | (20) | | 36 | Quick Step - Innergetic | + 02:27:56 |
| 129 | (20) | | 31 | Cofidis | + 02:27:57 |
| 130 | (9) | | 27 | Davitamon-Lotto | + 02:29:32 |
| 131 | (23) | | 31 | Team T-Mobile | + 02:29:42 |
| 132 | (9) | | 30 | Illes Balears - Caisse d'Epargne | + 02:30:17 |
| 133 | (33) | | 22 | Gerolsteiner | + 02:30:27 |
| 134 | (17) | | 31 | Discovery Channel | + 02:30:32 |
| 135 | (11) | | 35 | Liquigas - Bianchi | + 02:30:47 |
| 136 | (6) | | 36 | Fassa Bortolo | + 02:31:06 |
| 137 | (8) | | 29 | Illes Balears - Caisse d'Epargne | + 02:31:42 |
| 138 | (22) | | 27 | Phonak Hearing Systems | + 02:33:04 |
| 139 | (8) | | 31 | Davitamon-Lotto | + 02:33:57 |
| 140 | (12) | | 31 | Bouygues Telecom | + 02:34:31 |
| 141 | (24) | | 24 | Rabobank | + 02:34:52 |
| 142 | (11) | | 24 | Bouygues Telecom | " |
| 143 | (12) | | 27 | Gerolsteiner | + 02:35:05 |
| 144 | (12) | | 28 | Domina Vacanze | + 02:35:16 |
| 145 | (17) | | 23 | Ceramica Panaria - Navigare | + 02:37:25 |
| 146 | (24) | | 24 | Phonak Hearing Systems | + 02:38:27 |
| 147 | (24) | | 23 | Team CSC | + 02:39:15 |
| 148 | (25) | | 21 | Quick Step - Innergetic | + 02:39:46 |
| 149 | (18) | | 25 | Team T-Mobile | + 02:40:01 |
| 150 | (13) | | 22 | Française des Jeux | + 02:40:03 |
| 151 | (17) | | 27 | Française des Jeux | + 02:43:44 |
| 152 | (17) | | 32 | Euskaltel - Euskadi | + 02:44:15 |
| 153 | (26) | | 34 | Lampre - Caffita | + 02:45:43 |
| 154 | (20) | | 26 | Selle Italia - Serramenti Diquigiovanni | + 02:47:50 |
| 155 | (20) | | 25 | Phonak Hearing Systems | + 02:48:08 |
| 156 | (21) | | 27 | Selle Italia - Serramenti Diquigiovanni | + 02:48:43 |
| 157 | (21) | | 29 | Selle Italia - Serramenti Diquigiovanni | + 02:51:00 |
| 158 | (22) | | 32 | Gerolsteiner | + 02:52:25 |
| 159 | (22) | | 22 | Bouygues Telecom | + 02:57:12 |
| 160 | (23) | | 28 | Selle Italia - Serramenti Diquigiovanni | + 03:12:25 |
