| 1 | - | | 32 |  Discovery Channel | 91:25:51 |
| 2 | - | | 33 |  Lampre - Caffita | + 28 |
| 3 | - | | 23 |  Selle Italia - Serramenti Diquigiovanni | + 45 |
| 4 | - | | 29 | Liquigas - Bianchi | + 02:42 |
| 5 | - | | 29 |  Saunier Duval - Prodir | + 03:11 |
| 6 | - | | 34 | Domina Vacanze | + 04:22 |
| 7 | - | | 24 | Illes Balears - Caisse d'Epargne | + 11:15 |
| 8 | - | | 29 |  Crédit Agricole | + 11:38 |
| 9 | - | | 30 | Fassa Bortolo | + 11:40 |
| 10 | - | | 24 | Ceramica Panaria - Navigare | + 12:33 |
| 11 | - | | 26 |  Davitamon-Lotto | + 13:49 |
| 12 | - | | 23 |  Gerolsteiner | + 14:42 |
| 13 | - | | 30 | Liquigas - Bianchi | + 15:26 |
| 14 | - | | 30 | Cofidis | + 15:52 |
| 15 | - | | 28 |  Phonak Hearing Systems | + 19:22 |
| 16 | - | | 29 | Illes Balears - Caisse d'Epargne | + 20:46 |
| 17 | - | | 27 | Euskaltel - Euskadi | + 21:55 |
| 18 | - | | 23 | Lampre - Caffita | + 24:05 |
| 19 | - | | 24 | Liberty Seguros - Würth | + 24:29 |
| 20 | - | | 29 | Selle Italia - Serramenti Diquigiovanni | + 25:37 |
| 21 | - | | 24 |  Rabobank | + 34:50 |
| 22 | - | | 29 | Lampre - Caffita | + 38:17 |
| 23 | - | | 31 | Crédit Agricole | + 44:55 |
| 24 | - | | 34 | Domina Vacanze | + 46:19 |
| 25 | - | | 26 | Team T-Mobile | + 50:49 |
| 26 | - | | 24 | Crédit Agricole | + 52:40 |
| 27 | - | | 26 | Davitamon-Lotto | + 56:02 |
| 28 | - | | 27 |  Team CSC | + 57:05 |
| 29 | - | | 23 | Rabobank | + 01:01:02 |
| 30 | - | | 27 | Phonak Hearing Systems | + 01:03:32 |
| 31 | - | | 31 | Liquigas - Bianchi | + 01:05:04 |
| 32 | - | | 27 | Ceramica Panaria - Navigare | " |
| 33 | - | | 28 | Davitamon-Lotto | + 01:05:59 |
| 34 | - | | 31 | Domina Vacanze | + 01:10:34 |
| 35 | - | | 28 | Bouygues Telecom | + 01:10:42 |
| 36 | - | | 25 | Crédit Agricole | + 01:12:25 |
| 37 | - | | 31 | Illes Balears - Caisse d'Epargne | + 01:14:24 |
| 38 | - | | 31 | Quick Step - Innergetic | + 01:18:04 |
| 39 | - | | 31 | Ceramica Panaria - Navigare | + 01:19:47 |
| 40 | - | | 29 | Cofidis | + 01:21:06 |
| 41 | - | | 22 | Phonak Hearing Systems | + 01:21:41 |
| 42 | - | | 25 | Team CSC | + 01:23:44 |
| 43 | - | | 26 | Saunier Duval - Prodir | + 01:24:06 |
| 44 | - | | 25 | Ceramica Panaria - Navigare | + 01:28:51 |
| 45 | - | | 36 | Liquigas - Bianchi | + 01:29:11 |
| 46 | - | | 27 | Liquigas - Bianchi | + 01:30:13 |
| 47 | - | | 25 | Liberty Seguros - Würth | + 01:33:08 |
| 48 | - | | 29 | Saunier Duval - Prodir | + 01:35:46 |
| 49 | - | | 28 | Euskaltel - Euskadi | + 01:42:00 |
| 50 | - | | 27 | Lampre - Caffita | + 01:43:33 |
| 51 | - | | 29 | Rabobank | + 01:44:57 |
| 52 | - | | 35 | Euskaltel - Euskadi | + 01:47:24 |
| 53 | - | | 32 | Quick Step - Innergetic | + 01:49:31 |
| 54 | - | | 34 | Cofidis | + 01:50:10 |
| 55 | - | | 29 | Lampre - Caffita | + 01:52:27 |
| 56 | - | | 32 | Team T-Mobile | + 01:57:49 |
| 57 | - | | 32 | Liberty Seguros - Würth | + 02:04:12 |
| 58 | - | | 25 | Team T-Mobile | + 02:05:22 |
| 59 | - | | 29 | Gerolsteiner | + 02:05:27 |
| 60 | - | | 34 | Discovery Channel | + 02:10:40 |
| 61 | - | | 30 | Liberty Seguros - Würth | + 02:11:16 |
| 62 | - | | 31 | Liberty Seguros - Würth | + 02:11:59 |
| 63 | (1) | | 34 | Team T-Mobile | + 02:14:25 |
| 64 | (1) | | 27 | Lampre - Caffita | + 02:14:29 |
| 65 | - | | 27 | Liberty Seguros - Würth | + 02:15:08 |
| 66 | - | | 26 | Lampre - Caffita | + 02:15:19 |
| 67 | - | | 32 | Lampre - Caffita | + 02:18:42 |
| 68 | - | | 26 | Euskaltel - Euskadi | + 02:21:21 |
| 69 | - | | 27 | Quick Step - Innergetic | + 02:24:32 |
| 70 | - | | 31 | Domina Vacanze | + 02:24:49 |
| 71 | - | | 21 | Française des Jeux | + 02:26:08 |
| 72 | - | | 30 | Française des Jeux | + 02:26:30 |
| 73 | - | | 32 | Team CSC | + 02:27:24 |
| 74 | - | | 24 | Domina Vacanze | + 02:29:35 |
| 75 | - | | 20 | Rabobank | + 02:30:20 |
| 76 | - | | 31 | Phonak Hearing Systems | + 02:30:31 |
| 77 | - | | 33 | Team CSC | + 02:31:24 |
| 78 | - | | 23 | Crédit Agricole | + 02:33:28 |
| 79 | - | | 24 | Saunier Duval - Prodir | + 02:37:52 |
| 80 | - | | 26 | Saunier Duval - Prodir | + 02:39:51 |
| 81 | - | | 26 | Française des Jeux | + 02:44:09 |
| 82 | - | | 22 | Bouygues Telecom | + 02:48:13 |
| 83 | - | | 22 | Euskaltel - Euskadi | + 02:49:40 |
| 84 | - | | 23 | Quick Step - Innergetic | + 02:51:29 |
| 85 | - | | 24 | Saunier Duval - Prodir | + 02:53:27 |
| 86 | - | | 28 | Selle Italia - Serramenti Diquigiovanni | + 02:53:38 |
| 87 | - | | 32 | Team CSC | + 02:57:00 |
| 88 | - | | 35 | Team CSC | + 02:57:09 |
| 89 | - | | 28 | Cofidis | + 02:57:21 |
| 90 | - | | 23 | Illes Balears - Caisse d'Epargne | + 02:58:31 |
| 91 | - | | 26 | Discovery Channel | + 03:00:13 |
| 92 | - | | 25 | Crédit Agricole | + 03:01:43 |
| 93 | - | | 28 | Fassa Bortolo | + 03:01:50 |
| 94 | - | | 30 | Phonak Hearing Systems | + 03:05:22 |
| 95 | - | | 27 | Ceramica Panaria - Navigare | + 03:05:35 |
| 96 | - | | 31 | Fassa Bortolo | + 03:06:25 |
| 97 | - | | 32 | Liquigas - Bianchi | + 03:06:26 |
| 98 | - | | 29 | Française des Jeux | + 03:08:38 |
| 99 | - | | 29 | Fassa Bortolo | + 03:09:25 |
| 100 | - | | 31 | Fassa Bortolo | + 03:09:30 |
| 101 | - | | 29 | Discovery Channel | + 03:11:01 |
| 102 | - | | 28 | Gerolsteiner | + 03:12:35 |
| 103 | - | | 31 | Fassa Bortolo | + 03:13:24 |
| 104 | - | | 26 | Team CSC | " |
| 105 | - | | 32 | Bouygues Telecom | + 03:15:06 |
| 106 | - | | 27 | Davitamon-Lotto | + 03:15:34 |
| 107 | - | | 29 | Discovery Channel | + 03:15:50 |
| 108 | - | | 23 | Rabobank | + 03:16:00 |
| 109 | - | | 23 | Domina Vacanze | + 03:16:02 |
| 110 | - | | 21 | Bouygues Telecom | + 03:17:22 |
| 111 | - | | 36 | Quick Step - Innergetic | + 03:18:37 |
| 112 | - | | 25 | Ceramica Panaria - Navigare | + 03:19:06 |
| 113 | - | | 31 | Team T-Mobile | + 03:19:35 |
| 114 | - | | 29 | Team CSC | + 03:20:46 |
| 115 | - | | 28 | Team T-Mobile | + 03:21:05 |
| 116 | - | | 30 | Selle Italia - Serramenti Diquigiovanni | + 03:22:50 |
| 117 | - | | 31 | Cofidis | + 03:22:58 |
| 118 | - | | 26 | Gerolsteiner | + 03:23:21 |
| 119 | - | | 32 | Fassa Bortolo | + 03:27:30 |
| 120 | - | | 25 | Phonak Hearing Systems | + 03:29:50 |
| 121 | - | | 29 | Quick Step - Innergetic | + 03:30:31 |
| 122 | - | | 31 | Fassa Bortolo | + 03:30:54 |
| 123 | - | | 25 | Crédit Agricole | + 03:32:51 |
| 124 | - | | 35 | Liquigas - Bianchi | + 03:33:23 |
| 125 | - | | 31 | Cofidis | + 03:34:09 |
| 126 | - | | 31 | Illes Balears - Caisse d'Epargne | " |
| 127 | - | | 36 | Quick Step - Innergetic | + 03:34:42 |
| 128 | - | | 25 | Team T-Mobile | + 03:35:39 |
| 129 | - | | 33 | Discovery Channel | + 03:36:36 |
| 130 | - | | 36 | Fassa Bortolo | + 03:36:40 |
| 131 | - | | 29 | Illes Balears - Caisse d'Epargne | + 03:38:04 |
| 132 | - | | 22 | Gerolsteiner | + 03:39:26 |
| 133 | - | | 27 | Phonak Hearing Systems | + 03:41:04 |
| 134 | - | | 31 | Bouygues Telecom | + 03:41:15 |
| 135 | - | | 24 | Rabobank | + 03:41:54 |
| 136 | - | | 31 | Davitamon-Lotto | + 03:42:24 |
| 137 | (1) | | 27 | Gerolsteiner | + 03:43:01 |
| 138 | (1) | | 31 | Discovery Channel | + 03:44:22 |
| 139 | (1) | | 24 | Phonak Hearing Systems | + 03:44:35 |
| 140 | (1) | | 23 | Team CSC | + 03:44:52 |
| 141 | (2) | | 24 | Bouygues Telecom | + 03:45:29 |
| 142 | - | | 21 | Quick Step - Innergetic | + 03:46:06 |
| 143 | - | | 23 | Ceramica Panaria - Navigare | + 03:48:26 |
| 144 | - | | 22 | Française des Jeux | + 03:49:32 |
| 145 | - | | 32 | Euskaltel - Euskadi | + 03:50:01 |
| 146 | - | | 27 | Française des Jeux | + 03:50:51 |
| 147 | - | | 22 | Bouygues Telecom | + 03:53:13 |
| 148 | - | | 34 | Lampre - Caffita | + 03:57:20 |
| 149 | - | | 27 | Selle Italia - Serramenti Diquigiovanni | + 03:57:37 |
| 150 | - | | 25 | Phonak Hearing Systems | + 03:59:09 |
| 151 | - | | 26 | Selle Italia - Serramenti Diquigiovanni | + 04:02:55 |
| 152 | - | | 32 | Gerolsteiner | + 04:04:03 |
| 153 | - | | 28 | Selle Italia - Serramenti Diquigiovanni | + 04:26:54 |
